Pasteurella multocida
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers UNMSM2
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 118
N50 Contigs 68,421 bp
Longest Contig 263,784 bp
Scaffold Count 118
N50 Scaffolds 68,421 bp
Longest Scaffold 263,784 bp
Genome Size 2,419,020 bp
Protein Count 2,438
Coding Density 89.38%
GC Percentage 40.14%
Ambiguous Bases 1
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM290011v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04168587
Country None
Date 2018-1-25
Genbank Assembly Accession GCA_002900115.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,419
Refseq Category na
Seq Rel Date 2018/01/25
Spanned Gaps 0
Species Taxid 747
SSU Count 1
Submitter Facultad de Medicina Veterinaria, Universidad Nacional Mayor de San Marcos
Taxid 44283
Total Gap Length 0
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LLKR00000000.1