Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers 151112C
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.93%
CheckM Contamination 0.12%
CheckM Strain Heterogeneity 0.0
5S Count 12
16S Count 12
23S Count 12
tRNA Count 20
Contig Count 4
N50 Contigs 3,581,305 bp
Longest Contig 3,581,305 bp
Scaffold Count 4
N50 Scaffolds 3,581,305 bp
Longest Scaffold 3,581,305 bp
Genome Size 5,821,717 bp
Protein Count 5,216
Coding Density 85.38%
GC Percentage 45.41%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM289386v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMD00019136
Country None
Date 2018-1-21
Genbank Assembly Accession GCA_002893865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 4
Protein Count 5,299
Refseq Category na
Seq Rel Date 2018/01/21
Spanned Gaps 1
Species Taxid 680
SSU Count 12
Submitter Academia Sinica
Taxid 680
Total Gap Length 100
Translation Table 11
tRNA Count (total) 134
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None