Pasteurella multocida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers CQ6
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 98.14%
CheckM Contamination 0.23%
CheckM Strain Heterogeneity 100.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 199
N50 Contigs 30,986 bp
Longest Contig 94,646 bp
Scaffold Count 36
N50 Scaffolds 185,975 bp
Longest Scaffold 526,022 bp
Genome Size 2,298,416 bp
Protein Count 2,169
Coding Density 87.87%
GC Percentage 40.20%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM289182v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03860035
Country None
Date 2018-1-18
Genbank Assembly Accession GCA_002891825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,137
Refseq Category na
Seq Rel Date 2018/01/18
Spanned Gaps 163
Species Taxid 747
SSU Count 1
Submitter Southwest University
Taxid 747
Total Gap Length 11303
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LIUO00000000.1