Stenotrophomonas bentonitica
Isolate HQ 5S/16S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas bentonitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas bentonitica
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas bentonitica
NCBI Strain Identifiers VV6
GTDB Type Material Designation not type material
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.91%
CheckM Contamination 1.93%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 6
23S Count 0
tRNA Count 20
Contig Count 45
N50 Contigs 400,665 bp
Longest Contig 982,678 bp
Scaffold Count 45
N50 Scaffolds 400,665 bp
Longest Scaffold 982,678 bp
Genome Size 4,364,949 bp
Protein Count 3,874
Coding Density 90.13%
GC Percentage 66.54%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM288773v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08241739
Country None
Date 2018-1-17
Genbank Assembly Accession GCA_002887735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 3,864
Refseq Category na
Seq Rel Date 2018/01/17
Spanned Gaps 0
Species Taxid 1450134
SSU Count 5
Submitter Huaqiao University
Taxid 1450134
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master PKQP00000000.1