Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
NCBI Strain Identifiers M18076-11
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 9
16S Count 3
23S Count 2
tRNA Count 20
Contig Count 228
N50 Contigs 58,857 bp
Longest Contig 274,303 bp
Scaffold Count 228
N50 Scaffolds 58,857 bp
Longest Scaffold 274,303 bp
Genome Size 4,434,821 bp
Protein Count 4,443
Coding Density 86.41%
GC Percentage 58.71%
Ambiguous Bases 54
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM288313v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07491057
Country None
Date 2018-1-16
Genbank Assembly Accession GCA_002883135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,476
Refseq Category na
Seq Rel Date 2018/01/16
Spanned Gaps 0
Species Taxid 645
SSU Count 6
Submitter Universite Laval
Taxid 645
Total Gap Length 0
Translation Table 11
tRNA Count (total) 92
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NQMJ00000000.1