Streptococcus salivarius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers UMB0051
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 28
N50 Contigs 156,289 bp
Longest Contig 340,337 bp
Scaffold Count 27
N50 Scaffolds 156,289 bp
Longest Scaffold 340,338 bp
Genome Size 2,377,669 bp
Protein Count 2,156
Coding Density 87.69%
GC Percentage 39.55%
Ambiguous Bases 0
GTDB representative GCF_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM286078v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN08193732
Country None
Date 2017-12-28
Genbank Assembly Accession GCA_002860785.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,187
Refseq Category na
Seq Rel Date 2017/12/28
Spanned Gaps 1
Species Taxid 1304
SSU Count 1
Submitter Loyola University Chicago
Taxid 1304
Total Gap Length 161
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master PKIA00000000.1