Pasteurella multocida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers SH01
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.13%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 24
N50 Contigs 348,796 bp
Longest Contig 627,243 bp
Scaffold Count 24
N50 Scaffolds 348,796 bp
Longest Scaffold 627,247 bp
Genome Size 2,361,492 bp
Protein Count 2,196
Coding Density 89.91%
GC Percentage 40.40%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM281754v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07503039
Country None
Date 2017-12-4
Genbank Assembly Accession GCA_002817545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,201
Refseq Category na
Seq Rel Date 2017/12/04
Spanned Gaps 7
Species Taxid 747
SSU Count 1
Submitter Shanghai Veterinary Research Institute, Chinese Academy of Agricultural Science
Taxid 747
Total Gap Length 9
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NQMU00000000.1