Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers M22710-11
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 12
16S Count 2
23S Count 4
tRNA Count 20
Contig Count 116
N50 Contigs 115,671 bp
Longest Contig 382,276 bp
Scaffold Count 116
N50 Scaffolds 115,671 bp
Longest Scaffold 382,276 bp
Genome Size 4,859,132 bp
Protein Count 4,751
Coding Density 86.49%
GC Percentage 58.42%
Ambiguous Bases 156
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM281118v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04219606
Country None
Date 2017-12-5
Genbank Assembly Accession GCA_002811185.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,643
Refseq Category na
Seq Rel Date 2017/12/05
Spanned Gaps 0
Species Taxid 645
SSU Count 11
Submitter Universite Laval
Taxid 29491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 110
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMTT00000000.1