Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers SH06
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 0
23S Count 0
tRNA Count 18
Contig Count 54
N50 Contigs 236,861 bp
Longest Contig 513,173 bp
Scaffold Count 54
N50 Scaffolds 236,861 bp
Longest Scaffold 513,174 bp
Genome Size 2,422,636 bp
Protein Count 2,307
Coding Density 90.17%
GC Percentage 40.17%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM275088v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07672571
Country None
Date 2017-11-5
Genbank Assembly Accession GCA_002750885.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,313
Refseq Category na
Seq Rel Date 2017/11/05
Spanned Gaps 0
Species Taxid 747
SSU Count 0
Submitter Chinese Academy of Agricultural Science
Taxid 747
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NWTU00000000.1