Pasteurella multocida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers SH03
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 3.64%
CheckM Strain Heterogeneity 100.0
5S Count 1
16S Count 2
23S Count 1
tRNA Count 19
Contig Count 28
N50 Contigs 307,810 bp
Longest Contig 621,009 bp
Scaffold Count 27
N50 Scaffolds 319,554 bp
Longest Scaffold 621,009 bp
Genome Size 2,456,549 bp
Protein Count 2,279
Coding Density 89.97%
GC Percentage 40.15%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM275081v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07672327
Country None
Date 2017-11-5
Genbank Assembly Accession GCA_002750815.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,285
Refseq Category na
Seq Rel Date 2017/11/05
Spanned Gaps 1
Species Taxid 747
SSU Count 2
Submitter Chinese Academy of Agricultural Science
Taxid 747
Total Gap Length 109
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NWTS00000000.1