Microbacterium sediminis
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinobacteria; o__Actinomycetales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sediminis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sediminis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Microbacterium; s__Microbacterium sediminis
NCBI Strain Identifiers YLB-01
GTDB Type Material Designation type strain of species
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 29
N50 Contigs 215,745 bp
Longest Contig 421,923 bp
Scaffold Count 24
N50 Scaffolds 215,745 bp
Longest Scaffold 655,808 bp
Genome Size 2,760,011 bp
Protein Count 2,603
Coding Density 91.99%
GC Percentage 71.89%
Ambiguous Bases 0
GTDB representative GCF_001689915.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM274199v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03075694
Country None
Date 2017-11-2
Genbank Assembly Accession GCA_002741995.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,591
Refseq Category na
Seq Rel Date 2017/11/02
Spanned Gaps 5
Species Taxid 904291
SSU Count 1
Submitter Third Institute of Oceanography,SOA
Taxid 904291
Total Gap Length 50
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master JRNY00000000.1