Stenotrophomonas maltophilia_O
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_O
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers MS_2009
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.69%
CheckM Strain Heterogeneity 33.33
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 125
N50 Contigs 72,851 bp
Longest Contig 294,417 bp
Scaffold Count 123
N50 Scaffolds 77,053 bp
Longest Scaffold 294,417 bp
Genome Size 4,796,729 bp
Protein Count 4,338
Coding Density 89.43%
GC Percentage 66.32%
Ambiguous Bases 0
GTDB representative GCF_002740025.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM273967v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06019675
Country None
Date 2017-10-31
Genbank Assembly Accession GCA_002739675.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,396
Refseq Category na
Seq Rel Date 2017/10/31
Spanned Gaps 2
Species Taxid 40324
SSU Count 1
Submitter University of Trento
Taxid 40324
Total Gap Length 1016
Translation Table 11
tRNA Count (total) 69
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MQXK00000000.1