Streptococcus salivarius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers MIT 14-1770-C1
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 45
N50 Contigs 149,736 bp
Longest Contig 303,558 bp
Scaffold Count 45
N50 Scaffolds 149,736 bp
Longest Scaffold 303,558 bp
Genome Size 2,355,730 bp
Protein Count 2,200
Coding Density 87.77%
GC Percentage 39.32%
Ambiguous Bases N/A
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM241760v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07710846
Country None
Date 2017-10-3
Genbank Assembly Accession GCA_002417605.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 2,188
Refseq Category na
Seq Rel Date 2017/10/03
Spanned Gaps 0
Species Taxid 1304
SSU Count 1
Submitter MIT
Taxid 1304
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NXMB00000000.1