Aeromonas salmonicida
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
NCBI Strain Identifiers ECFood+05
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 58
N50 Contigs 211,061 bp
Longest Contig 694,616 bp
Scaffold Count 58
N50 Scaffolds 211,061 bp
Longest Scaffold 694,616 bp
Genome Size 4,714,983 bp
Protein Count 4,267
Coding Density 87.34%
GC Percentage 58.78%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM231704v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07450651
Country None
Date 2017-9-20
Genbank Assembly Accession GCA_002317045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,259
Refseq Category na
Seq Rel Date 2017/09/20
Spanned Gaps 0
Species Taxid 645
SSU Count 1
Submitter JCVI
Taxid 645
Total Gap Length 0
Translation Table 11
tRNA Count (total) 82
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master NVQH00000000.1