Clavibacter insidiosus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Clavibacter; s__Clavibacter insidiosus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Clavibacter; s__Clavibacter michiganensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Clavibacter; s__Clavibacter michiganensis; sb__Clavibacter michiganensis subsp. insidiosus
NCBI Strain Identifiers LMG 3663
GTDB Type Material Designation type strain of subspecies
GTDB Representative of Species True (7 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.49%
CheckM Contamination 1.11%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 3
N50 Contigs 3,244,133 bp
Longest Contig 3,244,133 bp
Scaffold Count 3
N50 Scaffolds 3,244,133 bp
Longest Scaffold 3,244,133 bp
Genome Size 3,387,165 bp
Protein Count 3,271
Coding Density 89.13%
GC Percentage 72.71%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM224056v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06579200
Country None
Date 2017-03-24
Genbank Assembly Accession GCA_002240565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 3,239
Refseq Category na
Seq Rel Date 2017/03/24
Spanned Gaps 0
Species Taxid 28447
SSU Count 2
Submitter Canadian Food Inspection Agency
Taxid 33014
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master MZMO00000000.1