Actinoalloteichus hoggarensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinobacteria; o__Mycobacteriales; f__Pseudonocardiaceae; g__Actinoalloteichus; s__Actinoalloteichus hoggarensis
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Actinoalloteichus; s__Actinoalloteichus hoggarensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Pseudonocardiales; f__Pseudonocardiaceae; g__Actinoalloteichus; s__Actinoalloteichus hoggarensis
NCBI Strain Identifiers DSM 45943
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.13%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 3
23S Count 3
tRNA Count 20
Contig Count 1
N50 Contigs 6,606,717 bp
Longest Contig 6,606,717 bp
Scaffold Count 1
N50 Scaffolds 6,606,717 bp
Longest Scaffold 6,606,717 bp
Genome Size 6,606,717 bp
Protein Count 5,543
Coding Density 82.06%
GC Percentage 71.15%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM223453v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN07353059
Country None
Date 2017-7-27
Genbank Assembly Accession GCA_002234535.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
Protein Count 5,571
Refseq Category representative genome
Seq Rel Date 2017/07/27
Spanned Gaps 0
Species Taxid 1470176
SSU Count 3
Submitter Bielefeld University
Taxid 1470176
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None