| GTDB Taxonomy | d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum |
| Unfiltered NCBI Taxonomy | d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium psychrophilum; x__Flavobacterium psychrophilum DSM 3660 = ATCC 49418 |
| NCBI Strain Identifiers | ATCC 49418 |
| GTDB Type Material Designation | type strain of species |
| GTDB Representative of Species | True (120 genomes in species cluster) |
| CheckM Completeness | 98.94% |
|---|---|
| CheckM Contamination | 0.35% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 0 |
| 16S Count | 1 |
| 23S Count | 1 |
| tRNA Count | 20 |
| Contig Count | 109 |
| N50 Contigs | 59,260 bp |
| Longest Contig | 178,171 bp |
| Scaffold Count | 83 |
| N50 Scaffolds | 73,660 bp |
| Longest Scaffold | 258,714 bp |
| Genome Size | 2,638,051 bp |
| Protein Count | 2,345 |
| Coding Density | 87.74% |
| GC Percentage | 32.47% |
| Ambiguous Bases | 10 |
| GTDB representative of species | True |
| Assembly Level | Scaffold |
|---|---|
| Assembly Name | ASM221740v1 |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMN06049063 |
| Country | None |
| Date | 2017-07-12 |
| Genbank Assembly Accession | GCA_002217405.1 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | None |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 2,357 |
| Refseq Category | na |
| Seq Rel Date | 2017/07/12 |
| Spanned Gaps | 26 |
| Species Taxid | 96345 |
| SSU Count | 1 |
| Submitter | FDA |
| Taxid | 1121894 |
| Total Gap Length | 2551 |
| Translation Table | 11 |
| tRNA Count (total) | 39 |
| Type Material | assembly from type material |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | MUHE00000000.1 |