Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii; x__Vibrio campbellii CAIM 519 = NBRC 15631
NCBI Strain Identifiers ATCC 25920;CAIM 519T
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (32 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.92%
CheckM Contamination 0.45%
CheckM Strain Heterogeneity 16.67
5S Count 12
16S Count 12
23S Count 12
tRNA Count 20
Contig Count 3
N50 Contigs 3,253,249 bp
Longest Contig 3,253,249 bp
Scaffold Count 3
N50 Scaffolds 3,253,249 bp
Longest Scaffold 3,253,249 bp
Genome Size 5,178,103 bp
Protein Count 4,698
Coding Density 84.08%
GC Percentage 45.08%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM216375v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05172285
Country None
Date 2017-6-2
Genbank Assembly Accession GCA_002163755.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 3
CDS Count 4,827
Refseq Category na
Seq Rel Date 2017/06/02
Spanned Gaps 0
Species Taxid 680
SSU Count 12
Submitter Naval Research Laboratory
Taxid 1224742
Total Gap Length 0
Translation Table 11
tRNA Count (total) 134
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None