Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers LA16-V1
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.77%
CheckM Contamination 1.03%
CheckM Strain Heterogeneity 22.22
5S Count 12
16S Count 12
23S Count 12
tRNA Count 20
Contig Count 6
N50 Contigs 3,579,637 bp
Longest Contig 3,579,637 bp
Scaffold Count 6
N50 Scaffolds 3,579,637 bp
Longest Scaffold 3,579,637 bp
Genome Size 6,124,368 bp
Protein Count 5,599
Coding Density 85.74%
GC Percentage 45.54%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM214265v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06909310
Country None
Date 2017-5-16
Genbank Assembly Accession GCA_002142655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 6
Protein Count 5,569
Refseq Category na
Seq Rel Date 2017/05/16
Spanned Gaps 0
Species Taxid 680
SSU Count 12
Submitter Korea Research Institute of Bioscience & Biotechnology
Taxid 680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 133
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None