Streptococcus salivarius
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers 85-06 S24
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 13
N50 Contigs 1,421,081 bp
Longest Contig 1,421,081 bp
Scaffold Count 13
N50 Scaffolds 1,421,271 bp
Longest Scaffold 1,421,271 bp
Genome Size 2,255,022 bp
Protein Count 2,073
Coding Density 88.69%
GC Percentage 39.85%
Ambiguous Bases 0
GTDB representative GCF_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM209400v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04942660
Country None
Date 2017-4-17
Genbank Assembly Accession GCA_002094005.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,079
Refseq Category na
Seq Rel Date 2017/04/17
Spanned Gaps 0
Species Taxid 1304
SSU Count 1
Submitter State University of Campinas
Taxid 1304
Total Gap Length 0
Translation Table 11
tRNA Count (total) 40
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LXOU00000000.1