Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
NCBI Strain Identifiers BG
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 7
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 236
N50 Contigs 53,183 bp
Longest Contig 158,438 bp
Scaffold Count 236
N50 Scaffolds 53,183 bp
Longest Scaffold 158,438 bp
Genome Size 4,790,288 bp
Protein Count 4,641
Coding Density 86.58%
GC Percentage 58.63%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM209369v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04529529
Country None
Date 2017-4-14
Genbank Assembly Accession GCA_002093695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 1
Protein Count 4,499
Refseq Category na
Seq Rel Date 2017/04/14
Spanned Gaps 0
Species Taxid 645
SSU Count 3
Submitter Institute of hydrobiology, chinese academy of sciences
Taxid 645
Total Gap Length 0
Translation Table 11
tRNA Count (total) 105
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LUHO00000000.1