Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Rouxiella; s__Rouxiella silvae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Rouxiella; s__Rouxiella silvae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Rouxiella; s__Rouxiella silvae
NCBI Strain Identifiers 213
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.56%
CheckM Contamination 0.69%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 132
N50 Contigs 69,852 bp
Longest Contig 236,921 bp
Scaffold Count 128
N50 Scaffolds 69,852 bp
Longest Scaffold 236,921 bp
Genome Size 5,281,376 bp
Protein Count 4,865
Coding Density 87.46%
GC Percentage 50.78%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM209362v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06100418
Country None
Date 2017-4-14
Genbank Assembly Accession GCA_002093625.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,846
Refseq Category na
Seq Rel Date 2017/04/14
Spanned Gaps 4
Species Taxid 1646373
SSU Count 1
Submitter Institut Pasteur
Taxid 1646373
Total Gap Length 1345
Translation Table 11
tRNA Count (total) 67
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master MRWD00000000.1