Lactococcus lactis_E
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis_E
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Lactococcus; s__Lactococcus lactis; sb__Lactococcus lactis subsp. cremoris
NCBI Strain Identifiers UC109
GTDB Type Material Designation not type material
GTDB Representative of Species True (53 genomes in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.38%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 7
23S Count 6
tRNA Count 20
Contig Count 8
N50 Contigs 2,248,099 bp
Longest Contig 2,248,099 bp
Scaffold Count 8
N50 Scaffolds 2,248,099 bp
Longest Scaffold 2,248,099 bp
Genome Size 2,415,714 bp
Protein Count 2,481
Coding Density 84.87%
GC Percentage 35.75%
Ambiguous Bases 3
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM207876v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04956304
Country None
Date 2019-1-3
Genbank Assembly Accession GCA_002078765.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 8
CDS Count 2,404
Refseq Category na
Seq Rel Date 2019/01/03
Spanned Gaps 0
Species Taxid 1358
SSU Count 6
Submitter University College Cork
Taxid 1359
Total Gap Length 0
Translation Table 11
tRNA Count (total) 62
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None