Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers LB102
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.18%
CheckM Strain Heterogeneity 0.0
5S Count 7
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 107
N50 Contigs 462,728 bp
Longest Contig 991,520 bp
Scaffold Count 90
N50 Scaffolds 852,180 bp
Longest Scaffold 1,047,310 bp
Genome Size 5,588,138 bp
Protein Count 4,958
Coding Density 86.44%
GC Percentage 45.51%
Ambiguous Bases 631
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM202761v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06473102
Country None
Date 2017-3-15
Genbank Assembly Accession GCA_002027615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 5,058
Refseq Category na
Seq Rel Date 2017/03/15
Spanned Gaps 17
Species Taxid 680
SSU Count 4
Submitter Network Project on Agricultural Bioinformatics and Computational Biology
Taxid 680
Total Gap Length 740
Translation Table 11
tRNA Count (total) 121
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MWRX00000000.1