Pasteurella multocida
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. septica
NCBI Strain Identifiers CIRMBP-0872
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 15
N50 Contigs 276,902 bp
Longest Contig 392,679 bp
Scaffold Count 13
N50 Scaffolds 352,737 bp
Longest Scaffold 618,151 bp
Genome Size 2,214,585 bp
Protein Count 2,037
Coding Density 89.79%
GC Percentage 40.30%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM202401v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06140947
Country None
Date 2017-3-8
Genbank Assembly Accession GCA_002024015.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,030
Refseq Category na
Seq Rel Date 2017/03/08
Spanned Gaps 2
Species Taxid 747
SSU Count 1
Submitter INRA
Taxid 115545
Total Gap Length 630
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MTIH00000000.1