Pasteurella multocida
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers CIRMBP-0877
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.02%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 29
N50 Contigs 190,235 bp
Longest Contig 405,568 bp
Scaffold Count 28
N50 Scaffolds 190,235 bp
Longest Scaffold 405,568 bp
Genome Size 2,349,029 bp
Protein Count 2,216
Coding Density 89.82%
GC Percentage 40.24%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM202392v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06140948
Country None
Date 2017-3-8
Genbank Assembly Accession GCA_002023925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,207
Refseq Category na
Seq Rel Date 2017/03/08
Spanned Gaps 1
Species Taxid 747
SSU Count 1
Submitter INRA
Taxid 44283
Total Gap Length 679
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MTII00000000.1