Pasteurella multocida
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers CIRMBP-0758
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.52%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 30
N50 Contigs 197,921 bp
Longest Contig 626,933 bp
Scaffold Count 29
N50 Scaffolds 197,921 bp
Longest Scaffold 626,933 bp
Genome Size 2,407,798 bp
Protein Count 2,303
Coding Density 89.67%
GC Percentage 40.17%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM202382v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06140940
Country None
Date 2017-3-8
Genbank Assembly Accession GCA_002023825.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 2,290
Refseq Category na
Seq Rel Date 2017/03/08
Spanned Gaps 1
Species Taxid 747
SSU Count 1
Submitter INRA
Taxid 44283
Total Gap Length 410
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MTEB00000000.1