Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers 1114GL
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.05%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 10
23S Count 9
tRNA Count 20
Contig Count 8
N50 Contigs 899,714 bp
Longest Contig 2,118,471 bp
Scaffold Count 2
N50 Scaffolds 3,515,540 bp
Longest Scaffold 3,515,540 bp
Genome Size 5,634,111 bp
Protein Count 4,998
Coding Density 86.11%
GC Percentage 45.47%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM199105v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04364235
Country None
Date 2017-2-10
Genbank Assembly Accession GCA_001991055.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
Protein Count 5,069
Refseq Category na
Seq Rel Date 2017/02/10
Spanned Gaps 7
Species Taxid 680
SSU Count 6
Submitter Academia Sinica
Taxid 680
Total Gap Length 6896
Translation Table 11
tRNA Count (total) 88
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None