Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; s__Vibrio campbellii
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Vibrionales; f__Vibrionaceae; g__Vibrio; x__Vibrio harveyi group; s__Vibrio campbellii
NCBI Strain Identifiers LMB29
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 97.05%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 13
16S Count 11
23S Count 13
tRNA Count 20
Contig Count 6
N50 Contigs 3,486,048 bp
Longest Contig 3,486,048 bp
Scaffold Count 6
N50 Scaffolds 3,486,048 bp
Longest Scaffold 3,486,048 bp
Genome Size 6,195,978 bp
Protein Count 5,603
Coding Density 85.52%
GC Percentage 45.06%
Ambiguous Bases 0
GTDB representative GCF_002163755.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM196932v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN06229929
Country None
Date 2017-1-23
Genbank Assembly Accession GCA_001969325.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 6
Protein Count 5,649
Refseq Category na
Seq Rel Date 2017/01/23
Spanned Gaps 0
Species Taxid 680
SSU Count 11
Submitter Hohai University
Taxid 680
Total Gap Length 0
Translation Table 11
tRNA Count (total) 127
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None