Exiguobacterium_A indicum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Exiguobacterales; f__Exiguobacteraceae; g__Exiguobacterium_A; s__Exiguobacterium_A indicum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__; g__Exiguobacterium; s__Exiguobacterium indicum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; x__Bacillales incertae sedis; x__Bacillales Family XII. Incertae Sedis; g__Exiguobacterium; s__Exiguobacterium indicum; x__Exiguobacterium indicum HHS 31
NCBI Strain Identifiers HHS 31
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (10 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 23
N50 Contigs 283,671 bp
Longest Contig 1,567,940 bp
Scaffold Count 23
N50 Scaffolds 283,671 bp
Longest Scaffold 1,567,940 bp
Genome Size 3,244,965 bp
Protein Count 3,351
Coding Density 89.45%
GC Percentage 46.64%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM193906v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03159272
Country India: Himalayan mountain ranges
Date 2017-1-6
Genbank Assembly Accession GCA_001939065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Melt water
Latitude Longitude None
Molecule Count N/A
CDS Count 3,281
Refseq Category na
Seq Rel Date 2017/01/06
Spanned Gaps 0
Species Taxid 296995
SSU Count 2
Submitter Centre for Cellular and Molecular Biology
Taxid 1358421
Total Gap Length 0
Translation Table 11
tRNA Count (total) 59
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master MPSZ00000000.1