Streptococcus salivarius
Isolate HQ 5S/16S/23S 17 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers 85-05 S23
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 17
Contig Count 89
N50 Contigs 58,282 bp
Longest Contig 228,239 bp
Scaffold Count 89
N50 Scaffolds 58,282 bp
Longest Scaffold 228,239 bp
Genome Size 2,239,681 bp
Protein Count 2,075
Coding Density 88.84%
GC Percentage 39.82%
Ambiguous Bases 0
GTDB representative GCF_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM190710v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04934536
Country Brazil
Date 2016-12-16
Genbank Assembly Accession GCA_001907105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source oral cavity; infant (15 months age)
Latitude Longitude 22.43 S 47.38 W
Molecule Count 0
Protein Count 2,071
Refseq Category na
Seq Rel Date 2016/12/16
Spanned Gaps 0
Species Taxid 1304
SSU Count 1
Submitter State University of Campinas
Taxid 1304
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LXIO00000000.1