Micromonospora sp001905095
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora sp001905095
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Micromonospora; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micromonosporales; f__Micromonosporaceae; g__Micromonospora; s__Micromonospora sp. CB01531
NCBI Strain Identifiers CB01531
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.95%
CheckM Contamination 2.89%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 164
N50 Contigs 125,908 bp
Longest Contig 400,102 bp
Scaffold Count 148
N50 Scaffolds 147,338 bp
Longest Scaffold 544,665 bp
Genome Size 9,244,015 bp
Protein Count 8,394
Coding Density 87.59%
GC Percentage 71.50%
Ambiguous Bases 3
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM190509v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04857208
Country China: Fujian Province
Date 2016-12-15
Genbank Assembly Accession GCA_001905095.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 8,291
Refseq Category na
Seq Rel Date 2016/12/15
Spanned Gaps 16
Species Taxid 1718947
SSU Count 1
Submitter The Scripps Research Institute
Taxid 1718947
Total Gap Length 1460
Translation Table 11
tRNA Count (total) 57
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LWLS00000000.1