Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers JF2507
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 11
16S Count 5
23S Count 3
tRNA Count 20
Contig Count 109
N50 Contigs 119,016 bp
Longest Contig 382,456 bp
Scaffold Count 109
N50 Scaffolds 119,016 bp
Longest Scaffold 382,456 bp
Genome Size 4,773,773 bp
Protein Count 4,635
Coding Density 86.40%
GC Percentage 58.45%
Ambiguous Bases 98
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM190210v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05728471
Country United Kingdom: Scotland
Date 2016-12-13
Genbank Assembly Accession GCA_001902105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,491
Refseq Category na
Seq Rel Date 2016/12/13
Spanned Gaps 0
Species Taxid 645
SSU Count 9
Submitter Universite Laval
Taxid 29491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 103
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MIIT00000000.1