Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers JF2506
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 9
16S Count 4
23S Count 3
tRNA Count 20
Contig Count 117
N50 Contigs 115,671 bp
Longest Contig 381,703 bp
Scaffold Count 117
N50 Scaffolds 115,671 bp
Longest Scaffold 381,703 bp
Genome Size 4,776,145 bp
Protein Count 4,625
Coding Density 86.37%
GC Percentage 58.44%
Ambiguous Bases 187
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM190206v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05728470
Country Norway
Date 2016-12-13
Genbank Assembly Accession GCA_001902065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,493
Refseq Category na
Seq Rel Date 2016/12/13
Spanned Gaps 0
Species Taxid 645
SSU Count 7
Submitter Universite Laval
Taxid 29491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 101
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MIIS00000000.1