Aeromonas salmonicida
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers 2009-157 K5
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.58%
CheckM Strain Heterogeneity 100.0
5S Count 11
16S Count 5
23S Count 4
tRNA Count 19
Contig Count 112
N50 Contigs 115,671 bp
Longest Contig 382,575 bp
Scaffold Count 112
N50 Scaffolds 115,671 bp
Longest Scaffold 382,575 bp
Genome Size 4,867,561 bp
Protein Count 4,759
Coding Density 86.45%
GC Percentage 58.43%
Ambiguous Bases 162
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM190204v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05728467
Country Canada: New Brunswick
Date 2016-12-13
Genbank Assembly Accession GCA_001902045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,608
Refseq Category na
Seq Rel Date 2016/12/13
Spanned Gaps 0
Species Taxid 645
SSU Count 12
Submitter Universite Laval
Taxid 29491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 107
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MIIQ00000000.1