Aeromonas salmonicida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Aeromonadales; f__Aeromonadaceae; g__Aeromonas; s__Aeromonas salmonicida; sb__Aeromonas salmonicida subsp. salmonicida
NCBI Strain Identifiers m23067-09
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.71%
CheckM Contamination 0.73%
CheckM Strain Heterogeneity 100.0
5S Count 9
16S Count 8
23S Count 7
tRNA Count 20
Contig Count 215
N50 Contigs 73,508 bp
Longest Contig 159,470 bp
Scaffold Count 215
N50 Scaffolds 73,508 bp
Longest Scaffold 159,470 bp
Genome Size 4,915,126 bp
Protein Count 4,913
Coding Density 86.14%
GC Percentage 58.38%
Ambiguous Bases 0
GTDB representative GCF_001643305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM190202v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05728466
Country None
Date 2016-12-13
Genbank Assembly Accession GCA_001902025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 0
Protein Count 4,697
Refseq Category na
Seq Rel Date 2016/12/13
Spanned Gaps 0
Species Taxid 645
SSU Count 12
Submitter Universite Laval
Taxid 29491
Total Gap Length 0
Translation Table 11
tRNA Count (total) 118
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MIIP00000000.1