Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
NCBI Strain Identifiers HS SKN01
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.01%
CheckM Contamination 0.34%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 48
N50 Contigs 207,675 bp
Longest Contig 414,981 bp
Scaffold Count 48
N50 Scaffolds 207,675 bp
Longest Scaffold 414,981 bp
Genome Size 2,446,354 bp
Protein Count 2,391
Coding Density 89.52%
GC Percentage 40.66%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM185759v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05603852
Country India
Date 2016-9-2
Genbank Assembly Accession GCA_001857595.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source lung
Latitude Longitude None
Molecule Count 0
Protein Count 2,303
Refseq Category na
Seq Rel Date 2016/09/02
Spanned Gaps 0
Species Taxid 747
SSU Count 3
Submitter SDAU
Taxid 747
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master MDXJ00000000.1