Streptococcus salivarius
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp. HMSC068F04
NCBI Strain Identifiers HMSC068F04
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.96%
CheckM Contamination 0.25%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 128
N50 Contigs 43,877 bp
Longest Contig 139,549 bp
Scaffold Count 90
N50 Scaffolds 54,924 bp
Longest Scaffold 139,549 bp
Genome Size 2,179,910 bp
Protein Count 2,006
Coding Density 86.34%
GC Percentage 39.62%
Ambiguous Bases 0
GTDB representative GCF_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM183745v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04498582
Country None
Date 2016-10-25
Genbank Assembly Accession GCA_001837455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude None
Molecule Count 0
Protein Count 2,029
Refseq Category na
Seq Rel Date 2016/10/25
Spanned Gaps 38
Species Taxid 1715051
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1715051
Total Gap Length 3800
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LTPD00000000.1