Eikenella corrodens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella sp. HMSC073A11
NCBI Strain Identifiers HMSC073A11
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 95.8%
CheckM Contamination 0.79%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 112
N50 Contigs 44,634 bp
Longest Contig 94,130 bp
Scaffold Count 39
N50 Scaffolds 309,983 bp
Longest Scaffold 888,768 bp
Genome Size 2,199,832 bp
Protein Count 2,053
Coding Density 82.65%
GC Percentage 55.66%
Ambiguous Bases 0
GTDB representative GCF_900187105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM181554v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04480449
Country None
Date 2016-10-21
Genbank Assembly Accession GCA_001815545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source abscess l hip
Latitude Longitude None
Molecule Count 0
Protein Count 2,112
Refseq Category na
Seq Rel Date 2016/10/21
Spanned Gaps 73
Species Taxid 1739535
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1739535
Total Gap Length 7300
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LTST00000000.1