Eikenella corrodens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella sp. HMSC061C02
NCBI Strain Identifiers HMSC061C02
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 95.93%
CheckM Contamination 0.49%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 111
N50 Contigs 33,567 bp
Longest Contig 112,803 bp
Scaffold Count 78
N50 Scaffolds 77,378 bp
Longest Scaffold 192,937 bp
Genome Size 2,284,273 bp
Protein Count 2,260
Coding Density 83.79%
GC Percentage 55.80%
Ambiguous Bases 0
GTDB representative GCF_900187105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM180903v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04495803
Country None
Date 2016-10-21
Genbank Assembly Accession GCA_001809035.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source trach aspirate
Latitude Longitude None
Molecule Count 0
Protein Count 2,280
Refseq Category na
Seq Rel Date 2016/10/21
Spanned Gaps 33
Species Taxid 1715021
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1715021
Total Gap Length 3300
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LTKM00000000.1