Stenotrophomonas bentonitica
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas bentonitica
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas sp. HMSC10F06
NCBI Strain Identifiers HMSC10F06
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.66%
CheckM Contamination 0.6%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 87
N50 Contigs 108,719 bp
Longest Contig 297,395 bp
Scaffold Count 63
N50 Scaffolds 157,671 bp
Longest Scaffold 297,395 bp
Genome Size 4,114,905 bp
Protein Count 3,623
Coding Density 90.18%
GC Percentage 66.81%
Ambiguous Bases 0
GTDB representative GCF_002887735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM180786v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03287020
Country None
Date 2016-10-21
Genbank Assembly Accession GCA_001807865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stool
Latitude Longitude None
Molecule Count 0
Protein Count 3,605
Refseq Category na
Seq Rel Date 2016/10/21
Spanned Gaps 24
Species Taxid 1581081
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1581081
Total Gap Length 480
Translation Table 11
tRNA Count (total) 60
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LWNH00000000.1