Streptococcus salivarius
Isolate HQ 5S/16S/23S 14 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus sp. HMSC10E12
NCBI Strain Identifiers HMSC10E12
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.4%
CheckM Contamination 1.34%
CheckM Strain Heterogeneity 14.29
5S Count 1
16S Count 1
23S Count 3
tRNA Count 14
Contig Count 120
N50 Contigs 74,312 bp
Longest Contig 254,012 bp
Scaffold Count 58
N50 Scaffolds 192,884 bp
Longest Scaffold 441,365 bp
Genome Size 2,347,668 bp
Protein Count 2,186
Coding Density 87.68%
GC Percentage 39.64%
Ambiguous Bases 0
GTDB representative GCF_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM180785v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03287009
Country None
Date 2016-10-21
Genbank Assembly Accession GCA_001807855.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Respiratory
Latitude Longitude None
Molecule Count 0
Protein Count 2,171
Refseq Category na
Seq Rel Date 2016/10/21
Spanned Gaps 62
Species Taxid 1581080
SSU Count 1
Submitter The Genome Institute at Washington University
Taxid 1581080
Total Gap Length 9080
Translation Table 11
tRNA Count (total) 24
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LTZZ00000000.1