Brachyspira hyodysenteriae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Spirochaetota; c__Brachyspirae; o__Brachyspirales; f__Brachyspiraceae; g__Brachyspira; s__Brachyspira hyodysenteriae
Filtered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Brachyspirales; f__Brachyspiraceae; g__Brachyspira; s__Brachyspira hyodysenteriae
Unfiltered NCBI Taxonomy d__Bacteria; p__Spirochaetes; c__Spirochaetia; o__Brachyspirales; f__Brachyspiraceae; g__Brachyspira; s__Brachyspira hyodysenteriae; x__Brachyspira hyodysenteriae ATCC 27164
NCBI Strain Identifiers B-78
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (26 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.2%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 2
N50 Contigs 3,041,447 bp
Longest Contig 3,041,447 bp
Scaffold Count 2
N50 Scaffolds 3,041,447 bp
Longest Scaffold 3,041,447 bp
Genome Size 3,074,045 bp
Protein Count 2,670
Coding Density 87.22%
GC Percentage 27.04%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM167678v2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN05172954
Country None
Date 2016-9-30
Genbank Assembly Accession GCA_001676785.2
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count 2
CDS Count 2,647
Refseq Category representative genome
Seq Rel Date 2016/09/30
Spanned Gaps 0
Species Taxid 159
SSU Count 1
Submitter University of Minnesota
Taxid 1266923
Total Gap Length 0
Translation Table 11
tRNA Count (total) 33
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master None