Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers ATCC 1702
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.55%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 25
N50 Contigs 529,156 bp
Longest Contig 630,802 bp
Scaffold Count 23
N50 Scaffolds 567,551 bp
Longest Scaffold 630,802 bp
Genome Size 2,318,103 bp
Protein Count 2,138
Coding Density 89.40%
GC Percentage 40.32%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM167054v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04219590
Country None
Date 2016-6-20
Genbank Assembly Accession GCA_001670545.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source liver
Latitude Longitude None
Molecule Count 0
Protein Count 2,127
Refseq Category na
Seq Rel Date 2016/06/20
Spanned Gaps 2
Species Taxid 747
SSU Count 3
Submitter Zeta Biosciences
Taxid 44283
Total Gap Length 1400
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LUDD00000000.1