Pasteurella multocida
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Pasteurellales; f__Pasteurellaceae; g__Pasteurella; s__Pasteurella multocida; sb__Pasteurella multocida subsp. multocida
NCBI Strain Identifiers ATCC 1662
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 16
N50 Contigs 532,880 bp
Longest Contig 632,572 bp
Scaffold Count 15
N50 Scaffolds 532,880 bp
Longest Scaffold 632,572 bp
Genome Size 2,267,908 bp
Protein Count 2,065
Coding Density 89.72%
GC Percentage 40.33%
Ambiguous Bases 0
GTDB representative GCF_000754275.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM167052v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04219585
Country None
Date 2016-6-20
Genbank Assembly Accession GCA_001670525.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source liver
Latitude Longitude None
Molecule Count 0
Protein Count 2,065
Refseq Category na
Seq Rel Date 2016/06/20
Spanned Gaps 1
Species Taxid 747
SSU Count 3
Submitter Zeta Biosciences
Taxid 44283
Total Gap Length 533
Translation Table 11
tRNA Count (total) 50
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LUDC00000000.1