Streptococcus salivarius
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Streptococcaceae; g__Streptococcus; s__Streptococcus salivarius
NCBI Strain Identifiers 20-12 S2
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000785515.1)
Genome Characteristics
CheckM Completeness 99.9%
CheckM Contamination 0.15%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 4
N50 Contigs 1,609,938 bp
Longest Contig 1,609,938 bp
Scaffold Count 4
N50 Scaffolds 1,609,938 bp
Longest Scaffold 1,609,938 bp
Genome Size 2,177,169 bp
Protein Count 1,975
Coding Density 88.49%
GC Percentage 39.83%
Ambiguous Bases 330
GTDB representative GCA_000785515.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM165964v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04931542
Country Brazil
Date 2016-6-7
Genbank Assembly Accession GCA_001659645.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude 22.43 S 47.38 W
Molecule Count N/A
CDS Count 1,991
Refseq Category na
Seq Rel Date 2016/06/07
Spanned Gaps 0
Species Taxid 1304
SSU Count 1
Submitter State University of Campinas
Taxid 1304
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LXMC00000000.1