Helicobacter pylori_A
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori_A
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
NCBI Strain Identifiers K26A1
GTDB Type Material Designation not type material
GTDB Representative of Species True (36 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.94%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 1,570,310 bp
Longest Contig 1,570,310 bp
Scaffold Count 1
N50 Scaffolds 1,570,310 bp
Longest Scaffold 1,570,310 bp
Genome Size 1,570,310 bp
Protein Count 1,485
Coding Density 90.51%
GC Percentage 38.72%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM165345v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02731784
Country Angola
Date 2016-5-27
Genbank Assembly Accession GCA_001653455.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source stomach
Latitude Longitude 15.3 S 19.00 E
Molecule Count 1
CDS Count 1,486
Refseq Category na
Seq Rel Date 2016/05/27
Spanned Gaps 0
Species Taxid 210
SSU Count 1
Submitter Veterinary Medicine University of Vienna
Taxid 210
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None