Eikenella corrodens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
NCBI Strain Identifiers NML130388
GTDB Type Material Designation not type material
GTDB Representative of Species False
Genome Characteristics
CheckM Completeness 96.52%
CheckM Contamination 0.73%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 13
N50 Contigs 198,002 bp
Longest Contig 533,111 bp
Scaffold Count 13
N50 Scaffolds 198,004 bp
Longest Scaffold 533,114 bp
Genome Size 2,188,187 bp
Protein Count 2,135
Coding Density 83.99%
GC Percentage 55.87%
Ambiguous Bases 0
GTDB representative GCF_900187105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM164831v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04931633
Country Canada: St John
Date 2016-5-19
Genbank Assembly Accession GCA_001648315.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source peritoneal fluid
Latitude Longitude None
Molecule Count 0
Protein Count 2,143
Refseq Category na
Seq Rel Date 2016/05/19
Spanned Gaps 0
Species Taxid 539
SSU Count 1
Submitter Public Health Agency of Canada
Taxid 539
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LXSI00000000.1