Eikenella corrodens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Burkholderiales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Betaproteobacteria; o__Neisseriales; f__Neisseriaceae; g__Eikenella; s__Eikenella corrodens
NCBI Strain Identifiers NML01-0328
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187105.1)
Genome Characteristics
CheckM Completeness 96.5%
CheckM Contamination 0.68%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 12
N50 Contigs 375,292 bp
Longest Contig 567,651 bp
Scaffold Count 12
N50 Scaffolds 375,292 bp
Longest Scaffold 567,651 bp
Genome Size 2,203,048 bp
Protein Count 2,162
Coding Density 84.10%
GC Percentage 55.92%
Ambiguous Bases N/A
GTDB representative GCA_900187105.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM164823v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04931630
Country Canada: Regina
Date 2016-5-19
Genbank Assembly Accession GCA_001648235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source left hand
Latitude Longitude None
Molecule Count N/A
CDS Count 2,194
Refseq Category na
Seq Rel Date 2016/05/19
Spanned Gaps 0
Species Taxid 539
SSU Count 1
Submitter Public Health Agency of Canada
Taxid 539
Total Gap Length 0
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LXSF00000000.1