Prochlorococcus_C marinus_B
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Cyanobacteria; c__Cyanobacteriia; o__PCC-6307; f__Cyanobiaceae; g__Prochlorococcus_C; s__Prochlorococcus_C marinus_B
Filtered NCBI Taxonomy d__Bacteria; p__Cyanobacteria; c__; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; x__Cyanobacteria/Melainabacteria group; p__Cyanobacteria; o__Synechococcales; f__Prochloraceae; g__Prochlorococcus; s__Prochlorococcus sp. MIT 1303
NCBI Strain Identifiers MIT 1303
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000011485.1)
Genome Characteristics
CheckM Completeness 99.73%
CheckM Contamination 0.14%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 47
N50 Contigs 135,805 bp
Longest Contig 725,082 bp
Scaffold Count 47
N50 Scaffolds 135,805 bp
Longest Scaffold 725,082 bp
Genome Size 2,560,150 bp
Protein Count 2,661
Coding Density 83.60%
GC Percentage 50.47%
Ambiguous Bases N/A
GTDB representative GCA_000011485.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM163196v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04100954
Country None
Date 2016-4-25
Genbank Assembly Accession GCA_001631965.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source ocean water
Latitude Longitude 22.75 N 158 W
Molecule Count N/A
CDS Count 2,517
Refseq Category na
Seq Rel Date 2016/04/25
Spanned Gaps 0
Species Taxid 1723647
SSU Count 1
Submitter MIT
Taxid 1723647
Total Gap Length 0
Translation Table 11
tRNA Count (total) 43
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LVHK00000000.1